BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H03LP1|AL427961
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1677 0.0
>3x_Contig1793
Length = 40499
Score = 1677 bits (846), Expect = 0.0
Identities = 853/854 (99%), Gaps = 1/854 (0%)
Strand = Plus / Plus
Query: 1 agatgaggctcggagagtcgaaaattctcacacagtggtggattcttatgatagaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 29364 agatgaggctcggagagtcgaaaattctcacacagtggtggattctt-tgatagaccagg 29422
Query: 61 cttatgaaaccagagagcagttcatgtcacaacgagtgtttttacaaaggtctagtgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29423 cttatgaaaccagagagcagttcatgtcacaacgagtgtttttacaaaggtctagtgaca 29482
Query: 121 gaatcttacagactttgcaacacattcctttgattaataatgtgatatcaaagataaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29483 gaatcttacagactttgcaacacattcctttgattaataatgtgatatcaaagataaaca 29542
Query: 181 ctagaagaaagaagaatgctgtaatattggcatccttaatatcaatttgtatcttagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29543 ctagaagaaagaagaatgctgtaatattggcatccttaatatcaatttgtatcttagtac 29602
Query: 241 tattttttacagcataaatagtatcaactgaggtaattaaaacttgataagatcactgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29603 tattttttacagcataaatagtatcaactgaggtaattaaaacttgataagatcactgtt 29662
Query: 301 aatgctatgataggtacgtaattcgttataaagggaagaatgcatttgtgtttgttctca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29663 aatgctatgataggtacgtaattcgttataaagggaagaatgcatttgtgtttgttctca 29722
Query: 361 tgcgcttctgtcactatgcttttggatgaaatttggtcgggagtaggttgtttcttctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29723 tgcgcttctgtcactatgcttttggatgaaatttggtcgggagtaggttgtttcttctga 29782
Query: 421 ttcgaagattgtaggaatacctgtgctaggatttcttgtctttgaattcctcaatacgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29783 ttcgaagattgtaggaatacctgtgctaggatttcttgtctttgaattcctcaatacgct 29842
Query: 481 cttgaaatggacttgtttgttctcagacgtctgagatctgtggctttctacgtttgaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29843 cttgaaatggacttgtttgttctcagacgtctgagatctgtggctttctacgtttgaggt 29902
Query: 541 tgtgttattagtaccgatggtttctaaatcagaaccaacgaacccagatgatgttttcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29903 tgtgttattagtaccgatggtttctaaatcagaaccaacgaacccagatgatgttttcac 29962
Query: 601 ctttaggagttcccaatgtcttctaaaccaatcggtataagctgaaagtggtaagtttag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29963 ctttaggagttcccaatgtcttctaaaccaatcggtataagctgaaagtggtaagtttag 30022
Query: 661 aggtgattcgtgcccttgatatatgcaaaaatcatatactaaaccaccagtgaaacttcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30023 aggtgattcgtgcccttgatatatgcaaaaatcatatactaaaccaccagtgaaacttcc 30082
Query: 721 cacgaatggaacgaccattggaacccagaagaaatggtgatgcgtgttaaaaatcacatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30083 cacgaatggaacgaccattggaacccagaagaaatggtgatgcgtgttaaaaatcacatc 30142
Query: 781 tttgtccatcccgattgttaagagagctagcctaggtcccatatctctcgcaggattcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30143 tttgtccatcccgattgttaagagagctagcctaggtcccatatctctcgcaggattcaa 30202
Query: 841 aacagcacctgtct 854
||||||||||||||
Sbjct: 30203 aacagcacctgtct 30216
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6277
Number of Sequences: 1807
Number of extensions: 6277
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)